Phylum Thermotogae
Protein Length (Details)
Average protein length
| Proteins Length | |
|---|---|
| For proteins with length <= 1000 | 305 |
| For all proteins | 314 |
Proteins longer than 1000
| Length Range | Proteins Count |
|---|---|
| 1001 - 2000 | 20 |
| 2001 - 5000 | 0 |
| 5001 - 10000 | 0 |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
| Superkingdom | Phylum | Organism | Proteins |
|---|---|---|---|
| Bacteria | Thermotogae | NC_000853.1 | 1856 |
Proteins by COGs (Details) (COG ordering)
| COG Group | COG | Proteins |
|---|---|---|
| Information storage and processing (Isp) | B - Chromatin structure and dynamics | 1 |
| J - Translation | 135 | |
| K - Transcription | 84 | |
| L - Replication, recombination and repair | 89 | |
| Total | 305 | |
| Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 22 |
| M - Cell wall/membrane biogenesis | 78 | |
| N - Cell motility | 57 | |
| O - Posttranslational modification, protein turnover, chaperones | 56 | |
| T - Signal transduction mechanisms | 72 | |
| U - Intracellular trafficking and secretion | 37 | |
| V - Defense mechanisms | 28 | |
| Total | 307 | |
| Metabolism (Me) | C - Energy production and conversion | 117 |
| E - Amino acid transport and metabolism | 184 | |
| F - Nucleotide transport and metabolism | 55 | |
| G - Carbohydrate transport and metabolism | 168 | |
| H - Coenzyme transport and metabolism | 60 | |
| I - Lipid transport and metabolism | 30 | |
| P - Inorganic ion transport and metabolism | 115 | |
| Q - Secondary metabolites biosynthesis, transport and catabolism | 15 | |
| Total | 670 | |
| Poorly characterized (Pc) | R - General function prediction only | 204 |
| S - Function unknown | 136 | |
| Total | 340 | |
| Not in cogs (N.C.) | - - Not in COGs | 288 |
| Total | 288 |
Amino Acids in Proteins With Disordered Regions
| Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
|---|---|---|---|---|---|---|---|
| Thermotogae | Ala | 5.85% | 4.22% | 4.44% | 4.62% | 4.83% | 5.02% |
| Arg | 5.54% | 7.03% | 7.20% | 7.53% | 7.61% | 7.72% | |
| Asn | 3.61% | 3.31% | 3.25% | 3.26% | 3.35% | 3.52% | |
| Asp | 4.96% | 4.89% | 4.73% | 4.65% | 4.72% | 4.75% | |
| Cys | 0.71% | 0.33% | 0.40% | 0.47% | 0.48% | 0.48% | |
| Gln | 2.01% | 2.45% | 2.70% | 2.86% | 3.13% | 3.30% | |
| Glu | 8.93% | 15.95% | 16.75% | 17.21% | 17.82% | 18.59% | |
| Gly | 6.91% | 6.04% | 5.38% | 4.80% | 4.55% | 4.20% | |
| His | 1.58% | 1.31% | 1.33% | 1.21% | 1.20% | 1.24% | |
| Ile | 7.18% | 4.33% | 4.67% | 5.19% | 5.45% | 5.76% | |
| Leu | 10.03% | 7.36% | 8.16% | 9.08% | 9.56% | 10.04% | |
| Lys | 7.62% | 12.95% | 12.74% | 12.72% | 12.66% | 12.80% | |
| Met | 2.40% | 3.54% | 2.53% | 2.55% | 2.51% | 2.57% | |
| Phe | 5.19% | 2.37% | 2.47% | 2.66% | 2.71% | 2.71% | |
| Pro | 3.99% | 4.68% | 4.60% | 4.25% | 4.07% | 3.77% | |
| Ser | 5.66% | 7.91% | 8.08% | 7.69% | 7.65% | 8.04% | |
| Thr | 4.53% | 4.04% | 4.07% | 3.93% | 3.89% | 4.20% | |
| Trp | 1.10% | 0.37% | 0.31% | 0.32% | 0.31% | 0.30% | |
| Tyr | 3.58% | 1.89% | 1.89% | 1.97% | 1.95% | 1.95% | |
| Val | 8.61% | 5.04% | 5.12% | 5.56% | 5.81% | 6.01% |
