Phylum Firmicutes
Protein Length (Details)
Average protein length
| Proteins Length | |
|---|---|
| For proteins with length <= 1000 | 282 |
| For all proteins | 295 |
Proteins longer than 1000
| Length Range | Proteins Count |
|---|---|
| 1001 - 2000 | 1834 |
| 2001 - 5000 | 167 |
| 5001 - 10000 | 15 |
Proteins longer than 10000
| Protein ID | Protein Lenght | Organism | AA Sequence |
|---|---|---|---|
| 49483625 | 10746 | NC_002952.2 | Download |
| 57651379 | 10498 | NC_002951.2 | Download |
| 57867844 | 10203 | NC_002976.3 | Download |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
Proteins by COGs (Details) (COG ordering)
| COG Group | COG | Proteins |
|---|---|---|
| Information storage and processing (Isp) | B - Chromatin structure and dynamics | 33 |
| J - Translation | 10666 | |
| K - Transcription | 11395 | |
| L - Replication, recombination and repair | 8872 | |
| Total | 30175 | |
| Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 1656 |
| M - Cell wall/membrane biogenesis | 7221 | |
| N - Cell motility | 1629 | |
| O - Posttranslational modification, protein turnover, chaperones | 4464 | |
| T - Signal transduction mechanisms | 5767 | |
| U - Intracellular trafficking and secretion | 2091 | |
| V - Defense mechanisms | 3281 | |
| W - Extracellular structures | 4 | |
| Z - Cytoskeleton | 6 | |
| Total | 24575 | |
| Metabolism (Me) | C - Energy production and conversion | 6959 |
| E - Amino acid transport and metabolism | 12496 | |
| F - Nucleotide transport and metabolism | 4934 | |
| G - Carbohydrate transport and metabolism | 11209 | |
| H - Coenzyme transport and metabolism | 5612 | |
| I - Lipid transport and metabolism | 4107 | |
| P - Inorganic ion transport and metabolism | 7580 | |
| Q - Secondary metabolites biosynthesis, transport and catabolism | 2112 | |
| Total | 51325 | |
| Poorly characterized (Pc) | R - General function prediction only | 17178 |
| S - Function unknown | 13663 | |
| Total | 30841 | |
| Not in cogs (N.C.) | - - Not in COGs | 44547 |
| Total | 44547 |
Amino Acids in Proteins With Disordered Regions
| Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
|---|---|---|---|---|---|---|---|
| Firmicutes | Ala | 7.08% | 5.94% | 6.49% | 6.95% | 7.23% | 7.57% |
| Arg | 3.94% | 4.52% | 4.58% | 4.53% | 4.40% | 4.27% | |
| Asn | 4.96% | 5.97% | 5.96% | 6.12% | 6.31% | 6.56% | |
| Asp | 5.28% | 5.95% | 6.02% | 6.12% | 6.27% | 6.46% | |
| Cys | 0.72% | 0.24% | 0.26% | 0.29% | 0.30% | 0.28% | |
| Gln | 3.81% | 5.02% | 5.43% | 5.81% | 6.05% | 6.33% | |
| Glu | 6.98% | 11.19% | 11.25% | 11.18% | 11.20% | 11.25% | |
| Gly | 6.51% | 5.71% | 5.48% | 5.16% | 5.10% | 5.12% | |
| His | 2.00% | 1.77% | 1.74% | 1.51% | 1.42% | 1.39% | |
| Ile | 7.96% | 4.22% | 4.28% | 4.61% | 4.70% | 4.71% | |
| Leu | 9.69% | 6.26% | 6.57% | 7.01% | 7.11% | 7.11% | |
| Lys | 7.39% | 12.90% | 12.41% | 12.31% | 12.27% | 12.27% | |
| Met | 2.59% | 3.38% | 2.38% | 2.30% | 2.20% | 2.08% | |
| Phe | 4.58% | 2.13% | 2.11% | 2.22% | 2.21% | 2.16% | |
| Pro | 3.44% | 3.91% | 4.05% | 4.00% | 4.03% | 4.05% | |
| Ser | 6.01% | 8.76% | 9.10% | 8.77% | 8.81% | 8.97% | |
| Thr | 5.58% | 5.79% | 6.13% | 6.38% | 6.62% | 6.88% | |
| Trp | 0.94% | 0.31% | 0.29% | 0.31% | 0.31% | 0.31% | |
| Tyr | 3.70% | 2.01% | 1.94% | 1.92% | 1.90% | 1.90% | |
| Val | 6.86% | 4.02% | 4.27% | 4.63% | 4.77% | 4.90% |
