Phylum Euryarchaeota
Protein Length (Details)
Average protein length
Proteins Length | |
---|---|
For proteins with length <= 1000 | 282 |
For all proteins | 294 |
Proteins longer than 1000
Length Range | Proteins Count |
---|---|
1001 - 2000 | 470 |
2001 - 5000 | 35 |
5001 - 10000 | 0 |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
Superkingdom | Phylum | Organism | Proteins |
---|---|---|---|
Archaea | Euryarchaeota | NC_000868.1 | 1779 |
Archaea | Euryarchaeota | NC_000909.1 | 1713 |
Archaea | Euryarchaeota | NC_000916.1 | 1872 |
Archaea | Euryarchaeota | NC_000917.1 | 2418 |
Archaea | Euryarchaeota | NC_000961.1 | 1953 |
Archaea | Euryarchaeota | NC_002578.1 | 1480 |
Archaea | Euryarchaeota | NC_002607.1 | 2075 |
Archaea | Euryarchaeota | NC_002689.2 | 1491 |
Archaea | Euryarchaeota | NC_003413.1 | 2124 |
Archaea | Euryarchaeota | NC_003551.1 | 1681 |
Archaea | Euryarchaeota | NC_003552.1 | 4526 |
Archaea | Euryarchaeota | NC_003901.1 | 3366 |
Archaea | Euryarchaeota | NC_005791.1 | 1714 |
Archaea | Euryarchaeota | NC_005877.1 | 1535 |
Archaea | Euryarchaeota | NC_006396.1 | 3131 |
Archaea | Euryarchaeota | NC_006624.1 | 2304 |
Archaea | Euryarchaeota | NC_007355.1 | 3605 |
Archaea | Euryarchaeota | NC_007426.1 | 2659 |
Archaea | Euryarchaeota | NC_007681.1 | 1534 |
Proteins by COGs (Details) (COG ordering)
COG Group | COG | Proteins |
---|---|---|
Information storage and processing (Isp) | A - RNA processing and modification | 27 |
B - Chromatin structure and dynamics | 71 | |
J - Translation | 3005 | |
K - Transcription | 1802 | |
L - Replication, recombination and repair | 2038 | |
Total | 6811 | |
Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 333 |
M - Cell wall/membrane biogenesis | 1181 | |
N - Cell motility | 462 | |
O - Posttranslational modification, protein turnover, chaperones | 1324 | |
T - Signal transduction mechanisms | 959 | |
U - Intracellular trafficking and secretion | 513 | |
V - Defense mechanisms | 468 | |
W - Extracellular structures | 1 | |
Total | 4809 | |
Metabolism (Me) | C - Energy production and conversion | 2800 |
E - Amino acid transport and metabolism | 2877 | |
F - Nucleotide transport and metabolism | 1042 | |
G - Carbohydrate transport and metabolism | 1380 | |
H - Coenzyme transport and metabolism | 2196 | |
I - Lipid transport and metabolism | 745 | |
P - Inorganic ion transport and metabolism | 1824 | |
Q - Secondary metabolites biosynthesis, transport and catabolism | 370 | |
Total | 12320 | |
Poorly characterized (Pc) | R - General function prediction only | 5340 |
S - Function unknown | 4058 | |
Total | 9398 | |
Not in cogs (N.C.) | - - Not in COGs | 10528 |
Total | 10528 |
Amino Acids in Proteins With Disordered Regions
Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
---|---|---|---|---|---|---|---|
Euryarchaeota | Ala | 7.63% | 6.76% | 7.39% | 7.91% | 8.24% | 8.62% |
Arg | 5.23% | 6.50% | 6.82% | 7.08% | 7.11% | 7.10% | |
Asn | 3.96% | 3.94% | 3.71% | 3.59% | 3.60% | 3.67% | |
Asp | 5.89% | 7.03% | 7.22% | 7.44% | 7.66% | 7.92% | |
Cys | 0.96% | 0.48% | 0.55% | 0.64% | 0.67% | 0.71% | |
Gln | 2.18% | 2.77% | 2.91% | 3.02% | 3.12% | 3.26% | |
Glu | 8.03% | 12.97% | 13.19% | 13.25% | 13.36% | 13.54% | |
Gly | 7.37% | 6.97% | 6.81% | 6.68% | 6.70% | 6.77% | |
His | 1.69% | 1.54% | 1.56% | 1.43% | 1.37% | 1.37% | |
Ile | 7.46% | 4.16% | 4.15% | 4.34% | 4.39% | 4.38% | |
Leu | 9.32% | 6.34% | 6.65% | 7.03% | 7.16% | 7.23% | |
Lys | 6.10% | 9.13% | 8.42% | 7.94% | 7.68% | 7.50% | |
Met | 2.38% | 3.15% | 2.25% | 2.16% | 2.05% | 1.96% | |
Phe | 4.08% | 1.96% | 1.98% | 2.09% | 2.10% | 2.08% | |
Pro | 4.12% | 5.17% | 5.29% | 5.22% | 5.24% | 5.20% | |
Ser | 6.03% | 8.61% | 8.72% | 8.26% | 8.20% | 8.28% | |
Thr | 5.22% | 5.52% | 5.84% | 6.05% | 6.23% | 6.51% | |
Trp | 1.00% | 0.37% | 0.36% | 0.39% | 0.40% | 0.41% | |
Tyr | 3.66% | 1.79% | 1.70% | 1.66% | 1.62% | 1.61% | |
Val | 7.69% | 4.84% | 5.07% | 5.46% | 5.63% | 5.78% |