Phylum Chloroflexi
Protein Length (Details)
Average protein length
| Proteins Length | |
|---|---|
| For proteins with length <= 1000 | 271 |
| For all proteins | 281 |
Proteins longer than 1000
| Length Range | Proteins Count |
|---|---|
| 1001 - 2000 | 34 |
| 2001 - 5000 | 0 |
| 5001 - 10000 | 0 |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
| Superkingdom | Phylum | Organism | Proteins |
|---|---|---|---|
| Bacteria | Chloroflexi | NC_002936.3 | 1579 |
| Bacteria | Chloroflexi | NC_007356.1 | 1457 |
Proteins by COGs (Details) (COG ordering)
| COG Group | COG | Proteins |
|---|---|---|
| Information storage and processing (Isp) | B - Chromatin structure and dynamics | 4 |
| J - Translation | 262 | |
| K - Transcription | 183 | |
| L - Replication, recombination and repair | 163 | |
| Total | 598 | |
| Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 26 |
| M - Cell wall/membrane biogenesis | 58 | |
| N - Cell motility | 16 | |
| O - Posttranslational modification, protein turnover, chaperones | 115 | |
| T - Signal transduction mechanisms | 135 | |
| U - Intracellular trafficking and secretion | 50 | |
| V - Defense mechanisms | 36 | |
| Total | 413 | |
| Metabolism (Me) | C - Energy production and conversion | 261 |
| E - Amino acid transport and metabolism | 232 | |
| F - Nucleotide transport and metabolism | 97 | |
| G - Carbohydrate transport and metabolism | 77 | |
| H - Coenzyme transport and metabolism | 151 | |
| I - Lipid transport and metabolism | 57 | |
| P - Inorganic ion transport and metabolism | 119 | |
| Q - Secondary metabolites biosynthesis, transport and catabolism | 19 | |
| Total | 939 | |
| Poorly characterized (Pc) | R - General function prediction only | 247 |
| S - Function unknown | 191 | |
| Total | 438 | |
| Not in cogs (N.C.) | - - Not in COGs | 758 |
| Total | 758 |
Amino Acids in Proteins With Disordered Regions
| Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
|---|---|---|---|---|---|---|---|
| Chloroflexi | Ala | 8.59% | 7.86% | 8.74% | 9.60% | 10.47% | 11.84% |
| Arg | 5.02% | 5.98% | 6.60% | 7.12% | 7.47% | 7.78% | |
| Asn | 3.92% | 4.39% | 4.10% | 3.93% | 3.94% | 3.99% | |
| Asp | 5.04% | 5.59% | 5.53% | 5.40% | 5.53% | 5.64% | |
| Cys | 1.36% | 0.61% | 0.74% | 0.87% | 0.92% | 0.92% | |
| Gln | 3.31% | 4.15% | 4.42% | 4.67% | 4.97% | 5.26% | |
| Glu | 6.49% | 10.54% | 10.72% | 11.10% | 11.38% | 11.89% | |
| Gly | 7.60% | 6.76% | 6.39% | 6.05% | 5.97% | 5.88% | |
| His | 1.84% | 1.59% | 1.57% | 1.32% | 1.26% | 1.22% | |
| Ile | 7.23% | 3.77% | 3.76% | 4.18% | 4.39% | 4.50% | |
| Leu | 10.32% | 6.92% | 7.43% | 8.21% | 8.40% | 8.48% | |
| Lys | 5.86% | 9.98% | 9.63% | 9.76% | 9.73% | 10.08% | |
| Met | 2.64% | 3.69% | 2.71% | 2.68% | 2.64% | 2.71% | |
| Phe | 3.83% | 1.79% | 1.78% | 1.91% | 1.91% | 1.85% | |
| Pro | 4.39% | 5.71% | 5.91% | 5.83% | 5.68% | 5.61% | |
| Ser | 6.34% | 9.61% | 9.82% | 9.01% | 8.87% | 8.71% | |
| Thr | 5.29% | 5.59% | 5.75% | 5.82% | 5.85% | 5.88% | |
| Trp | 1.05% | 0.30% | 0.27% | 0.32% | 0.30% | 0.30% | |
| Tyr | 3.16% | 1.58% | 1.47% | 1.49% | 1.55% | 1.65% | |
| Val | 6.72% | 3.58% | 3.74% | 3.96% | 4.04% | 4.19% |
