Phylum Chlamydiae/Verrucomicrobia
Protein Length (Details)
Average protein length
| Proteins Length | |
|---|---|
| For proteins with length <= 1000 | 317 |
| For all proteins | 339 |
Proteins longer than 1000
| Length Range | Proteins Count |
|---|---|
| 1001 - 2000 | 239 |
| 2001 - 5000 | 5 |
| 5001 - 10000 | 0 |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
Proteins by COGs (Details) (COG ordering)
| COG Group | COG | Proteins |
|---|---|---|
| Information storage and processing (Isp) | B - Chromatin structure and dynamics | 10 |
| J - Translation | 1170 | |
| K - Transcription | 261 | |
| L - Replication, recombination and repair | 655 | |
| Total | 2039 | |
| Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 151 |
| M - Cell wall/membrane biogenesis | 512 | |
| N - Cell motility | 146 | |
| O - Posttranslational modification, protein turnover, chaperones | 369 | |
| T - Signal transduction mechanisms | 199 | |
| U - Intracellular trafficking and secretion | 381 | |
| V - Defense mechanisms | 34 | |
| Total | 1620 | |
| Metabolism (Me) | C - Energy production and conversion | 449 |
| E - Amino acid transport and metabolism | 558 | |
| F - Nucleotide transport and metabolism | 214 | |
| G - Carbohydrate transport and metabolism | 361 | |
| H - Coenzyme transport and metabolism | 402 | |
| I - Lipid transport and metabolism | 342 | |
| P - Inorganic ion transport and metabolism | 303 | |
| Q - Secondary metabolites biosynthesis, transport and catabolism | 60 | |
| Total | 2538 | |
| Poorly characterized (Pc) | R - General function prediction only | 732 |
| S - Function unknown | 466 | |
| Total | 1198 | |
| Not in cogs (N.C.) | - - Not in COGs | 3810 |
| Total | 3810 |
Amino Acids in Proteins With Disordered Regions
| Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
|---|---|---|---|---|---|---|---|
| Chlamydiae/Verrucomicrobia | Ala | 7.00% | 6.05% | 6.59% | 7.09% | 7.34% | 7.58% |
| Arg | 4.53% | 5.15% | 5.30% | 5.36% | 5.39% | 5.40% | |
| Asn | 3.97% | 4.50% | 4.36% | 4.24% | 4.25% | 4.36% | |
| Asp | 4.55% | 4.99% | 4.84% | 4.80% | 4.89% | 4.89% | |
| Cys | 1.57% | 0.64% | 0.70% | 0.82% | 0.83% | 0.82% | |
| Gln | 4.22% | 5.44% | 5.73% | 5.99% | 6.12% | 6.29% | |
| Glu | 6.56% | 10.21% | 10.17% | 10.22% | 10.25% | 10.33% | |
| Gly | 6.11% | 5.42% | 5.19% | 4.93% | 4.97% | 5.06% | |
| His | 2.40% | 2.12% | 2.02% | 1.78% | 1.66% | 1.61% | |
| Ile | 7.02% | 3.76% | 3.88% | 4.11% | 4.17% | 4.21% | |
| Leu | 11.31% | 7.60% | 7.95% | 8.42% | 8.48% | 8.43% | |
| Lys | 6.25% | 10.14% | 9.67% | 9.48% | 9.52% | 9.54% | |
| Met | 2.01% | 2.62% | 1.88% | 1.82% | 1.73% | 1.69% | |
| Phe | 4.82% | 2.46% | 2.47% | 2.59% | 2.56% | 2.54% | |
| Pro | 4.32% | 5.57% | 5.65% | 5.70% | 5.74% | 5.69% | |
| Ser | 7.84% | 12.18% | 12.46% | 11.96% | 11.88% | 11.96% | |
| Thr | 5.24% | 5.70% | 6.01% | 6.25% | 6.39% | 6.59% | |
| Trp | 1.01% | 0.31% | 0.30% | 0.34% | 0.35% | 0.36% | |
| Tyr | 3.25% | 1.66% | 1.61% | 1.57% | 1.56% | 1.54% | |
| Val | 6.03% | 3.50% | 3.67% | 3.98% | 4.11% | 4.23% |
