Protein Length   (Details)

Average protein length

Proteins Length
For proteins with length <= 1000307
For all proteins324

Proteins longer than 1000

Length RangeProteins Count
1001 - 2000845
2001 - 500080
5001 - 100003

Disordered Regions   (Details)

Number of Disordered Regions by COGs of Proteins   (Details)

NOTE: Mean and standard deviation on this chart are computed only for COGs with positive values.

Proteins by Phyla

SuperkingdomPhylumOrganismProteins
Bacteria Betaproteobacteria NC_002927.3 4993
Bacteria Betaproteobacteria NC_002928.3 4184
Bacteria Betaproteobacteria NC_002929.2 3436
Bacteria Betaproteobacteria NC_002946.2 2002
Bacteria Betaproteobacteria NC_003112.2 2063
Bacteria Betaproteobacteria NC_003116.1 1909
Bacteria Betaproteobacteria NC_003295.1 3437
Bacteria Betaproteobacteria NC_004757.1 2458
Bacteria Betaproteobacteria NC_005085.1 4406
Bacteria Betaproteobacteria NC_006349.2 2029
Bacteria Betaproteobacteria NC_006350.1 3397
Bacteria Betaproteobacteria NC_006513.1 4119
Bacteria Betaproteobacteria NC_007298.1 4165
Bacteria Betaproteobacteria NC_007347.1 3439
Bacteria Betaproteobacteria NC_007404.1 2825
Bacteria Betaproteobacteria NC_007434.1 3733
Bacteria Betaproteobacteria NC_007509.1 1209
Bacteria Betaproteobacteria NC_007614.1 2756
Bacteria Betaproteobacteria NC_007651.1 3274

Proteins by COGs   (Details)   (COG ordering)

COG GroupCOGProteins
Information storage and processing (Isp)A - RNA processing and modification24
B - Chromatin structure and dynamics39
J - Translation2844
K - Transcription3836
L - Replication, recombination and repair2856
Total9371
Cellular processes (Cp)D - Cell cycle control, mitosis and meiosis516
M - Cell wall/membrane biogenesis3348
N - Cell motility1243
O - Posttranslational modification, protein turnover, chaperones2050
T - Signal transduction mechanisms2566
U - Intracellular trafficking and secretion1690
V - Defense mechanisms615
W - Extracellular structures8
Z - Cytoskeleton2
Total10707
Metabolism (Me)C - Energy production and conversion3635
E - Amino acid transport and metabolism4725
F - Nucleotide transport and metabolism1072
G - Carbohydrate transport and metabolism2297
H - Coenzyme transport and metabolism2300
I - Lipid transport and metabolism2389
P - Inorganic ion transport and metabolism2718
Q - Secondary metabolites biosynthesis, transport and catabolism1457
Total19105
Poorly characterized (Pc)R - General function prediction only5430
S - Function unknown4801
Total10231
Not in cogs (N.C.)- - Not in COGs12645
Total12645

Amino Acids in Proteins With Disordered Regions

PhylumAA% in prots.% in disordered regions L>=1% in disordered regions L>=11% in disordered regions L>=21% in disordered regions L>=31% in disordered regions L>=41
BetaproteobacteriaAla12.75%13.57%14.85%15.87%16.42%16.97%
Arg7.41%9.79%10.56%11.18%11.57%11.97%
Asn2.79%2.87%2.59%2.43%2.37%2.36%
Asp5.43%6.06%5.88%5.78%5.76%5.76%
Cys0.99%0.52%0.60%0.69%0.74%0.77%
Gln3.75%4.77%4.88%4.98%5.06%5.14%
Glu5.39%7.47%7.17%6.89%6.79%6.71%
Gly8.22%8.24%8.10%7.90%7.92%8.03%
His2.33%2.35%2.34%2.26%2.26%2.31%
Ile4.72%2.29%2.24%2.34%2.38%2.38%
Leu10.43%6.72%7.04%7.42%7.50%7.43%
Lys3.35%4.88%4.29%3.94%3.79%3.69%
Met2.37%2.93%2.18%2.06%1.96%1.85%
Phe3.56%1.62%1.60%1.66%1.65%1.62%
Pro5.13%7.37%7.59%7.59%7.57%7.56%
Ser5.28%7.93%7.79%7.28%7.12%7.07%
Thr4.96%5.04%4.96%4.88%4.85%4.82%
Trp1.34%0.40%0.40%0.44%0.44%0.44%
Tyr2.46%1.10%1.01%0.97%0.93%0.90%
Val7.35%4.09%4.33%4.64%4.80%4.95%