Phylum Bacteroidetes/Chlorobi
Protein Length (Details)
Average protein length
| Proteins Length | |
|---|---|
| For proteins with length <= 1000 | 323 |
| For all proteins | 354 |
Proteins longer than 1000
| Length Range | Proteins Count |
|---|---|
| 1001 - 2000 | 730 |
| 2001 - 5000 | 14 |
| 5001 - 10000 | 3 |
Proteins longer than 10000
| Protein ID | Protein Lenght | Organism | AA Sequence |
|---|---|---|---|
| 78188592 | 36805 | NC_007514.1 | Download |
| 78188594 | 20646 | NC_007514.1 | Download |
| 78189208 | 16311 | NC_007514.1 | Download |
Disordered Regions (Details)
Number of Disordered Regions by COGs of Proteins (Details)
NOTE: Mean and standard deviation on this chart
are computed only for COGs with positive values.
Proteins by Phyla
| Superkingdom | Phylum | Organism | Proteins |
|---|---|---|---|
| Bacteria | Bacteroidetes/Chlorobi | NC_002932.3 | 2240 |
| Bacteria | Bacteroidetes/Chlorobi | NC_002950.2 | 1909 |
| Bacteria | Bacteroidetes/Chlorobi | NC_003228.3 | 4184 |
| Bacteria | Bacteroidetes/Chlorobi | NC_004663.1 | 4778 |
| Bacteria | Bacteroidetes/Chlorobi | NC_006347.1 | 4577 |
| Bacteria | Bacteroidetes/Chlorobi | NC_007512.1 | 2083 |
| Bacteria | Bacteroidetes/Chlorobi | NC_007514.1 | 2002 |
| Bacteria | Bacteroidetes/Chlorobi | NC_007677.1 | 2800 |
Proteins by COGs (Details) (COG ordering)
| COG Group | COG | Proteins |
|---|---|---|
| Information storage and processing (Isp) | B - Chromatin structure and dynamics | 2 |
| J - Translation | 1125 | |
| K - Transcription | 1003 | |
| L - Replication, recombination and repair | 1161 | |
| Total | 3210 | |
| Cellular processes (Cp) | D - Cell cycle control, mitosis and meiosis | 201 |
| M - Cell wall/membrane biogenesis | 1741 | |
| N - Cell motility | 92 | |
| O - Posttranslational modification, protein turnover, chaperones | 629 | |
| T - Signal transduction mechanisms | 848 | |
| U - Intracellular trafficking and secretion | 423 | |
| V - Defense mechanisms | 468 | |
| Total | 4190 | |
| Metabolism (Me) | C - Energy production and conversion | 1091 |
| E - Amino acid transport and metabolism | 1220 | |
| F - Nucleotide transport and metabolism | 503 | |
| G - Carbohydrate transport and metabolism | 1227 | |
| H - Coenzyme transport and metabolism | 1008 | |
| I - Lipid transport and metabolism | 471 | |
| P - Inorganic ion transport and metabolism | 1119 | |
| Q - Secondary metabolites biosynthesis, transport and catabolism | 198 | |
| Total | 6492 | |
| Poorly characterized (Pc) | R - General function prediction only | 2043 |
| S - Function unknown | 1151 | |
| Total | 3194 | |
| Not in cogs (N.C.) | - - Not in COGs | 8212 |
| Total | 8212 |
Amino Acids in Proteins With Disordered Regions
| Phylum | AA | % in prots. | % in disordered regions L>=1 | % in disordered regions L>=11 | % in disordered regions L>=21 | % in disordered regions L>=31 | % in disordered regions L>=41 |
|---|---|---|---|---|---|---|---|
| Bacteroidetes/Chlorobi | Ala | 7.98% | 7.47% | 8.36% | 9.23% | 9.76% | 10.26% |
| Arg | 5.37% | 6.52% | 7.16% | 7.71% | 7.98% | 8.22% | |
| Asn | 4.38% | 4.63% | 4.18% | 3.80% | 3.63% | 3.58% | |
| Asp | 5.57% | 6.44% | 6.42% | 6.42% | 6.49% | 6.62% | |
| Cys | 1.12% | 0.39% | 0.45% | 0.53% | 0.56% | 0.57% | |
| Gln | 3.43% | 4.34% | 4.52% | 4.70% | 4.86% | 5.05% | |
| Glu | 6.58% | 10.58% | 10.45% | 10.38% | 10.47% | 10.65% | |
| Gly | 7.19% | 7.13% | 7.09% | 6.90% | 6.92% | 7.03% | |
| His | 1.98% | 1.78% | 1.78% | 1.58% | 1.53% | 1.52% | |
| Ile | 6.39% | 3.23% | 3.13% | 3.35% | 3.39% | 3.42% | |
| Leu | 9.50% | 6.15% | 6.60% | 7.26% | 7.49% | 7.62% | |
| Lys | 5.60% | 8.99% | 7.78% | 7.21% | 6.94% | 6.78% | |
| Met | 2.61% | 3.26% | 2.44% | 2.41% | 2.34% | 2.24% | |
| Phe | 4.36% | 1.94% | 1.96% | 2.11% | 2.12% | 2.10% | |
| Pro | 4.15% | 5.59% | 5.93% | 6.05% | 6.16% | 6.19% | |
| Ser | 6.29% | 9.44% | 9.66% | 9.08% | 8.90% | 8.85% | |
| Thr | 5.68% | 5.96% | 6.22% | 6.28% | 6.37% | 6.51% | |
| Trp | 1.22% | 0.38% | 0.38% | 0.40% | 0.41% | 0.42% | |
| Tyr | 3.88% | 1.84% | 1.76% | 1.66% | 1.60% | 1.56% | |
| Val | 6.71% | 3.91% | 4.25% | 4.68% | 4.88% | 5.09% |
