Protein Length   (Details)

Average protein length

Proteins Length
For proteins with length <= 1000309
For all proteins329

Proteins longer than 1000

Length RangeProteins Count
1001 - 2000947
2001 - 5000112
5001 - 1000012

Proteins longer than 10000

Protein IDProtein LenghtOrganismAA Sequence
5402700714474NC_006361.1Download

Disordered Regions   (Details)

Number of Disordered Regions by COGs of Proteins   (Details)

NOTE: Mean and standard deviation on this chart are computed only for COGs with positive values.

Proteins by Phyla

SuperkingdomPhylumOrganismProteins
Bacteria Actinobacteria NC_000962.2 3989
Bacteria Actinobacteria NC_002677.1 1599
Bacteria Actinobacteria NC_002755.2 4123
Bacteria Actinobacteria NC_002935.2 2272
Bacteria Actinobacteria NC_002944.2 4350
Bacteria Actinobacteria NC_002945.3 3920
Bacteria Actinobacteria NC_003155.4 7577
Bacteria Actinobacteria NC_003450.3 2993
Bacteria Actinobacteria NC_003888.3 7767
Bacteria Actinobacteria NC_004307.2 1727
Bacteria Actinobacteria NC_004369.1 2938
Bacteria Actinobacteria NC_004551.1 783
Bacteria Actinobacteria NC_004572.3 808
Bacteria Actinobacteria NC_006085.1 2297
Bacteria Actinobacteria NC_006087.1 2030
Bacteria Actinobacteria NC_006361.1 5683
Bacteria Actinobacteria NC_006958.1 3057
Bacteria Actinobacteria NC_007164.1 2103
Bacteria Actinobacteria NC_007333.1 3109

Proteins by COGs   (Details)   (COG ordering)

COG GroupCOGProteins
Information storage and processing (Isp)A - RNA processing and modification19
B - Chromatin structure and dynamics6
J - Translation2848
K - Transcription4500
L - Replication, recombination and repair2740
Total9696
Cellular processes (Cp)D - Cell cycle control, mitosis and meiosis464
M - Cell wall/membrane biogenesis2165
N - Cell motility248
O - Posttranslational modification, protein turnover, chaperones1612
T - Signal transduction mechanisms2237
U - Intracellular trafficking and secretion468
V - Defense mechanisms812
Z - Cytoskeleton7
Total7857
Metabolism (Me)C - Energy production and conversion3014
E - Amino acid transport and metabolism3956
F - Nucleotide transport and metabolism1360
G - Carbohydrate transport and metabolism3386
H - Coenzyme transport and metabolism2503
I - Lipid transport and metabolism2775
P - Inorganic ion transport and metabolism2395
Q - Secondary metabolites biosynthesis, transport and catabolism2158
Total19858
Poorly characterized (Pc)R - General function prediction only6170
S - Function unknown3489
Total9659
Not in cogs (N.C.)- - Not in COGs18808
Total18808

Amino Acids in Proteins With Disordered Regions

PhylumAA% in prots.% in disordered regions L>=1% in disordered regions L>=11% in disordered regions L>=21% in disordered regions L>=31% in disordered regions L>=41
ActinobacteriaAla12.61%12.54%13.28%13.92%14.29%14.62%
Arg7.33%9.12%9.45%9.59%9.58%9.44%
Asn2.38%2.45%2.30%2.25%2.26%2.33%
Asp5.97%6.74%6.53%6.36%6.33%6.30%
Cys0.82%0.44%0.47%0.53%0.55%0.56%
Gln3.03%3.60%3.64%3.65%3.69%3.75%
Glu5.53%7.59%7.30%7.04%6.94%6.84%
Gly9.00%9.93%10.03%10.19%10.49%11.02%
His2.26%2.16%2.13%1.99%1.93%1.91%
Ile4.27%1.98%1.94%2.00%2.00%1.98%
Leu9.88%6.41%6.64%6.93%6.99%6.93%
Lys2.53%3.54%3.20%3.00%2.91%2.87%
Met1.99%2.35%1.84%1.72%1.60%1.50%
Phe3.02%1.40%1.40%1.44%1.45%1.45%
Pro5.70%8.55%8.83%8.97%9.07%9.20%
Ser5.55%8.13%7.98%7.56%7.45%7.40%
Thr6.08%6.56%6.63%6.64%6.64%6.71%
Trp1.46%0.55%0.56%0.60%0.62%0.63%
Tyr2.15%1.08%1.04%1.02%1.02%1.01%
Val8.43%4.86%5.03%5.26%5.33%5.35%