RepeatPlus package can be download from http://bioinfo.matf.bg.ac.rs/home/downloads.wafl?cat=Software&project=RepeatsPlus
Installtion is simple - just unpack downloaded archive

Directory structure

--->  Readme.txt: this file


--->  Programs: source and executable versions of programs. 
      --->  StatRepeats   : source and executable versions (Linux, Windows) of StatRepeats program
      --->  Repeats       : source and executable versions (Linux, Windows) of Repeats program
      --->  RepeatsPlus   : source and executable versions (Linux, Windows) and help file for RepeatsPlusUI graphical user interface
      --->  DrawRepeats   : source and executable versions (Linux, Windows) of DrawRepeats program
      --->  MotifSearch   : source and executable versions (Linux, Windows) of MotifSearch program
      --->  license.txt   : file with licenses
      
--->  Help: help with options for StatRepeats, Repeats, MotifSearch and DrawRepeats program      
      --->  examples      : examples with input and results for each of previous programs. For successful call from html files, "examples" must be sub-directory in the directory where html files located

All programs have precompled version. Each directory includes script for compile program at Linux (tested on Ubuntu 20.04LTS), and corresponding files for compilation under Windows. 
Note: standalone version (in directories) of programs are named as "program_name.version.release[.exe]". To use it with RepeatPlus graphical interface StatRepeats and Repeats programs must be copied to the same directory where RepeatsPlusUI is located, and renamed to "program_name[.exe]", without version and release qualificators. 

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RepeatPlus and programs included in this package should be used only for pure academic purpose and commercial use is strictly prohibited.

Please cite:
Jelovic A. RepeatsPlus - program for finding motifs and repeats in data sequences. J Bioinform Comput Biol. 2021 Apr 24:2150010. doi: 10.1142/S0219720021500104. Epub ahead of print. PMID: 33896395.

Please send queries and bug reports to: <ana@jelovic.com> with "RepeatPlus" in the mail subject

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Please send queries and bug reports to: <ana@jelovic.com> with "RepeatPlus" in the mail subject